.. Licensed to the Apache Software Foundation (ASF) under one .. or more contributor license agreements. See the NOTICE file .. distributed with this work for additional information .. regarding copyright ownership. The ASF licenses this file .. to you under the Apache License, Version 2.0 (the .. "License"); you may not use this file except in compliance .. with the License. You may obtain a copy of the License at .. http://www.apache.org/licenses/LICENSE-2.0 .. Unless required by applicable law or agreed to in writing, .. software distributed under the License is distributed on an .. "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY .. KIND, either express or implied. See the License for the .. specific language governing permissions and limitations .. under the License. .. currentmodule:: pyarrow .. _data: Data Types and In-Memory Data Model =================================== Apache Arrow defines columnar array data structures by composing type metadata with memory buffers, like the ones explained in the documentation on :ref:`Memory and IO `. These data structures are exposed in Python through a series of interrelated classes: * **Type Metadata**: Instances of ``pyarrow.DataType``, which describe a logical array type * **Schemas**: Instances of ``pyarrow.Schema``, which describe a named collection of types. These can be thought of as the column types in a table-like object. * **Arrays**: Instances of ``pyarrow.Array``, which are atomic, contiguous columnar data structures composed from Arrow Buffer objects * **Record Batches**: Instances of ``pyarrow.RecordBatch``, which are a collection of Array objects with a particular Schema * **Tables**: Instances of ``pyarrow.Table``, a logical table data structure in which each column consists of one or more ``pyarrow.Array`` objects of the same type. We will examine these in the sections below in a series of examples. .. _data.types: Type Metadata ------------- Apache Arrow defines language agnostic column-oriented data structures for array data. These include: * **Fixed-length primitive types**: numbers, booleans, date and times, fixed size binary, decimals, and other values that fit into a given number * **Variable-length primitive types**: binary, string * **Nested types**: list, struct, and union * **Dictionary type**: An encoded categorical type (more on this later) Each logical data type in Arrow has a corresponding factory function for creating an instance of that type object in Python: .. ipython:: python import pyarrow as pa t1 = pa.int32() t2 = pa.string() t3 = pa.binary() t4 = pa.binary(10) t5 = pa.timestamp('ms') t1 print(t1) print(t4) print(t5) We use the name **logical type** because the **physical** storage may be the same for one or more types. For example, ``int64``, ``float64``, and ``timestamp[ms]`` all occupy 64 bits per value. These objects are `metadata`; they are used for describing the data in arrays, schemas, and record batches. In Python, they can be used in functions where the input data (e.g. Python objects) may be coerced to more than one Arrow type. The :class:`~pyarrow.Field` type is a type plus a name and optional user-defined metadata: .. ipython:: python f0 = pa.field('int32_field', t1) f0 f0.name f0.type Arrow supports **nested value types** like list, struct, and union. When creating these, you must pass types or fields to indicate the data types of the types' children. For example, we can define a list of int32 values with: .. ipython:: python t6 = pa.list_(t1) t6 A `struct` is a collection of named fields: .. ipython:: python fields = [ pa.field('s0', t1), pa.field('s1', t2), pa.field('s2', t4), pa.field('s3', t6), ] t7 = pa.struct(fields) print(t7) For convenience, you can pass ``(name, type)`` tuples directly instead of :class:`~pyarrow.Field` instances: .. ipython:: python t8 = pa.struct([('s0', t1), ('s1', t2), ('s2', t4), ('s3', t6)]) print(t8) t8 == t7 See :ref:`Data Types API ` for a full listing of data type functions. .. _data.schema: Schemas ------- The :class:`~pyarrow.Schema` type is similar to the ``struct`` array type; it defines the column names and types in a record batch or table data structure. The :func:`pyarrow.schema` factory function makes new Schema objects in Python: .. ipython:: python my_schema = pa.schema([('field0', t1), ('field1', t2), ('field2', t4), ('field3', t6)]) my_schema In some applications, you may not create schemas directly, only using the ones that are embedded in :ref:`IPC messages `. .. _data.array: Arrays ------ For each data type, there is an accompanying array data structure for holding memory buffers that define a single contiguous chunk of columnar array data. When you are using PyArrow, this data may come from IPC tools, though it can also be created from various types of Python sequences (lists, NumPy arrays, pandas data). A simple way to create arrays is with ``pyarrow.array``, which is similar to the ``numpy.array`` function. By default PyArrow will infer the data type for you: .. ipython:: python arr = pa.array([1, 2, None, 3]) arr But you may also pass a specific data type to override type inference: .. ipython:: python pa.array([1, 2], type=pa.uint16()) The array's ``type`` attribute is the corresponding piece of type metadata: .. ipython:: python arr.type Each in-memory array has a known length and null count (which will be 0 if there are no null values): .. ipython:: python len(arr) arr.null_count Scalar values can be selected with normal indexing. ``pyarrow.array`` converts ``None`` values to Arrow nulls; we return the special ``pyarrow.NA`` value for nulls: .. ipython:: python arr[0] arr[2] Arrow data is immutable, so values can be selected but not assigned. Arrays can be sliced without copying: .. ipython:: python arr[1:3] None values and NAN handling ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ As mentioned in the above section, the Python object ``None`` is always converted to an Arrow null element on the conversion to ``pyarrow.Array``. For the float NaN value which is either represented by the Python object ``float('nan')`` or ``numpy.nan`` we normally convert it to a *valid* float value during the conversion. If an integer input is supplied to ``pyarrow.array`` that contains ``np.nan``, ``ValueError`` is raised. To handle better compatibility with Pandas, we support interpreting NaN values as null elements. This is enabled automatically on all ``from_pandas`` function and can be enable on the other conversion functions by passing ``from_pandas=True`` as a function parameter. List arrays ~~~~~~~~~~~ ``pyarrow.array`` is able to infer the type of simple nested data structures like lists: .. ipython:: python nested_arr = pa.array([[], None, [1, 2], [None, 1]]) print(nested_arr.type) Struct arrays ~~~~~~~~~~~~~ For other kinds of nested arrays, such as struct arrays, you currently need to pass the type explicitly. Struct arrays can be initialized from a sequence of Python dicts or tuples: .. ipython:: python ty = pa.struct([('x', pa.int8()), ('y', pa.bool_())]) pa.array([{'x': 1, 'y': True}, {'x': 2, 'y': False}], type=ty) pa.array([(3, True), (4, False)], type=ty) When initializing a struct array, nulls are allowed both at the struct level and at the individual field level. If initializing from a sequence of Python dicts, a missing dict key is handled as a null value: .. ipython:: python pa.array([{'x': 1}, None, {'y': None}], type=ty) You can also construct a struct array from existing arrays for each of the struct's components. In this case, data storage will be shared with the individual arrays, and no copy is involved: .. ipython:: python xs = pa.array([5, 6, 7], type=pa.int16()) ys = pa.array([False, True, True]) arr = pa.StructArray.from_arrays((xs, ys), names=('x', 'y')) arr.type arr Union arrays ~~~~~~~~~~~~ The union type represents a nested array type where each value can be one (and only one) of a set of possible types. There are two possible storage types for union arrays: sparse and dense. In a sparse union array, each of the child arrays has the same length as the resulting union array. They are adjuncted with a ``int8`` "types" array that tells, for each value, from which child array it must be selected: .. ipython:: python xs = pa.array([5, 6, 7]) ys = pa.array([False, False, True]) types = pa.array([0, 1, 1], type=pa.int8()) union_arr = pa.UnionArray.from_sparse(types, [xs, ys]) union_arr.type union_arr In a dense union array, you also pass, in addition to the ``int8`` "types" array, a ``int32`` "offsets" array that tells, for each value, at each offset in the selected child array it can be found: .. ipython:: python xs = pa.array([5, 6, 7]) ys = pa.array([False, True]) types = pa.array([0, 1, 1, 0, 0], type=pa.int8()) offsets = pa.array([0, 0, 1, 1, 2], type=pa.int32()) union_arr = pa.UnionArray.from_dense(types, offsets, [xs, ys]) union_arr.type union_arr Dictionary Arrays ~~~~~~~~~~~~~~~~~ The **Dictionary** type in PyArrow is a special array type that is similar to a factor in R or a ``pandas.Categorical``. It enables one or more record batches in a file or stream to transmit integer *indices* referencing a shared **dictionary** containing the distinct values in the logical array. This is particularly often used with strings to save memory and improve performance. The way that dictionaries are handled in the Apache Arrow format and the way they appear in C++ and Python is slightly different. We define a special :class:`~.DictionaryArray` type with a corresponding dictionary type. Let's consider an example: .. ipython:: python indices = pa.array([0, 1, 0, 1, 2, 0, None, 2]) dictionary = pa.array(['foo', 'bar', 'baz']) dict_array = pa.DictionaryArray.from_arrays(indices, dictionary) dict_array Here we have: .. ipython:: python print(dict_array.type) dict_array.indices dict_array.dictionary When using :class:`~.DictionaryArray` with pandas, the analogue is ``pandas.Categorical`` (more on this later): .. ipython:: python dict_array.to_pandas() .. _data.record_batch: Record Batches -------------- A **Record Batch** in Apache Arrow is a collection of equal-length array instances. Let's consider a collection of arrays: .. ipython:: python data = [ pa.array([1, 2, 3, 4]), pa.array(['foo', 'bar', 'baz', None]), pa.array([True, None, False, True]) ] A record batch can be created from this list of arrays using ``RecordBatch.from_arrays``: .. ipython:: python batch = pa.RecordBatch.from_arrays(data, ['f0', 'f1', 'f2']) batch.num_columns batch.num_rows batch.schema batch[1] A record batch can be sliced without copying memory like an array: .. ipython:: python batch2 = batch.slice(1, 3) batch2[1] .. _data.table: Tables ------ The PyArrow :class:`~.Table` type is not part of the Apache Arrow specification, but is rather a tool to help with wrangling multiple record batches and array pieces as a single logical dataset. As a relevant example, we may receive multiple small record batches in a socket stream, then need to concatenate them into contiguous memory for use in NumPy or pandas. The Table object makes this efficient without requiring additional memory copying. Considering the record batch we created above, we can create a Table containing one or more copies of the batch using ``Table.from_batches``: .. ipython:: python batches = [batch] * 5 table = pa.Table.from_batches(batches) table table.num_rows The table's columns are instances of :class:`~.ChunkedArray`, which is a container for one or more arrays of the same type. .. ipython:: python c = table[0] c c.num_chunks c.chunk(0) As you'll see in the :ref:`pandas section `, we can convert these objects to contiguous NumPy arrays for use in pandas: .. ipython:: python c.to_pandas() Multiple tables can also be concatenated together to form a single table using ``pyarrow.concat_tables``, if the schemas are equal: .. ipython:: python tables = [table] * 2 table_all = pa.concat_tables(tables) table_all.num_rows c = table_all[0] c.num_chunks This is similar to ``Table.from_batches``, but uses tables as input instead of record batches. Record batches can be made into tables, but not the other way around, so if your data is already in table form, then use ``pyarrow.concat_tables``. Custom Schema and Field Metadata -------------------------------- TODO